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Onychomycosis OM is a common fungal nail infection. Based on the rich mycobial diversity in healthy toenails, we speculated that this is lost in OM due to the predominance of a single pathogen. We used next generation sequencing to obtain insights into the biodiversity of fungal communities in both healthy individuals and OM patients. By sequencing, a total of operational-taxonomic units were found in OM patients and healthy controls.
Interestingly, a classifier distinguished three distinct subsets: healthy controls and two groups within OM patients with either a low or high abundance of Trichophyton. Diversity per sample was decreased in controls compared to cases with low Trichophyton abundance LTA , while cases with a high Trichophyton abundance HTA showed a lower diversity.
Variation of mycobial communities between the samples showed shifts in the community structure between cases and controls—mainly driven by HTA cases. Collectively, our data provides an in-depth characterization of fungal diversity in health and OM. Our findings also suggest that onychomycosis develops either through pathogen-driven mechanisms, i. Patients exhibit symptoms such as white or yellow nail discoloration, thickening, roughness, and separation of the nail from the nail bed.
The current understanding of OM, as a mostly single pathogen-driven infection is based on its current clinical diagnostics, specifically microscopy and culture of clinical samples.